Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.01■□□□□ 0.47
Cacna1fQ9JIS7 Gm17271-201ENSMUST00000165535 355 ntBASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Mir7036b-201ENSMUST00000184791 63 ntBASIC18■□□□□ 0.47
Cacna1fQ9JIS7 AC139382.1-201ENSMUST00000221402 498 ntBASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Gm16198-201ENSMUST00000118766 670 ntBASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Gm27321-201ENSMUST00000185021 205 ntBASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Cacna1fQ9JIS7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Gm9385-201ENSMUST00000117563 472 ntBASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.99■□□□□ 0.47
Cacna1fQ9JIS7 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cacna1fQ9JIS7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cacna1fQ9JIS7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms