Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Smco4Q9JIS3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Smco4Q9JIS3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Smco4Q9JIS3 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Gm12134-201ENSMUST00000122109 520 ntBASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Smco4Q9JIS3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.88□□□□□ -0.35
Smco4Q9JIS3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smco4Q9JIS3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms