Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl28Q9JIL2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Ccl28Q9JIL2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl28Q9JIL2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl28Q9JIL2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl28Q9JIL2 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ccl28Q9JIL2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Gm15565-201ENSMUST00000118890 427 ntBASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Gm18959-201ENSMUST00000208954 655 ntBASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 App-207ENSMUST00000227737 2827 ntBASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccl28Q9JIL2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Mir1668-201ENSMUST00000184114 107 ntBASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccl28Q9JIL2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Gm45058-201ENSMUST00000205810 766 ntBASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccl28Q9JIL2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms