Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ube3bQ9ES34 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Mir5126-201ENSMUST00000175513 77 ntBASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Gm6550-201ENSMUST00000187574 993 ntBASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.94■□□□□ 0.62
Ube3bQ9ES34 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.93■□□□□ 0.62
Ube3bQ9ES34 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ube3bQ9ES34 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ube3bQ9ES34 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Gm7222-201ENSMUST00000117512 906 ntBASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 AV026068-213ENSMUST00000223675 1171 ntBASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms