Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Gm10052-201ENSMUST00000168019 960 ntBASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Gm7729-201ENSMUST00000050143 801 ntBASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Lime1Q9EQR5 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lime1Q9EQR5 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lime1Q9EQR5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lime1Q9EQR5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lime1Q9EQR5 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lime1Q9EQR5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lime1Q9EQR5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms