Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16■□□□□ 0.15
Vps35Q9EQH3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16■□□□□ 0.15
Vps35Q9EQH3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Vps35Q9EQH3 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Gm9889-202ENSMUST00000206983 1577 ntBASIC16■□□□□ 0.15
Vps35Q9EQH3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vps35Q9EQH3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps35Q9EQH3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Gm18669-201ENSMUST00000216049 778 ntBASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps35Q9EQH3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vps35Q9EQH3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms