Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdc40Q9DC48 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Birc2-201ENSMUST00000054878 378 ntBASIC14.81□□□□□ -0.04
Cdc40Q9DC48 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdc40Q9DC48 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Mir8098-201ENSMUST00000184011 137 ntBASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdc40Q9DC48 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Gm36967-201ENSMUST00000193814 266 ntBASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdc40Q9DC48 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms