Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rrp8Q9DB85 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rrp8Q9DB85 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rrp8Q9DB85 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rrp8Q9DB85 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.6■□□□□ 0.09
Rrp8Q9DB85 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Rrp8Q9DB85 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rrp8Q9DB85 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rrp8Q9DB85 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Gm5682-201ENSMUST00000173402 505 ntBASIC15.59■□□□□ 0.09
Rrp8Q9DB85 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rrp8Q9DB85 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rrp8Q9DB85 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rrp8Q9DB85 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rrp8Q9DB85 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Gm17271-201ENSMUST00000165535 355 ntBASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Gm10576-201ENSMUST00000191927 825 ntBASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Gm37153-201ENSMUST00000193637 231 ntBASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rrp8Q9DB85 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Gm8344-201ENSMUST00000119813 856 ntBASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.57■□□□□ 0.08
Rrp8Q9DB85 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rrp8Q9DB85 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Gm45167-201ENSMUST00000208007 322 ntBASIC15.56■□□□□ 0.08
Rrp8Q9DB85 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rrp8Q9DB85 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms