Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Chmp2aQ9DB34 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Chmp2aQ9DB34 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Gm13312-201ENSMUST00000119631 718 ntBASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Chmp2aQ9DB34 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Chmp2aQ9DB34 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Chmp2aQ9DB34 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms