Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Stag1Q9D3E6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Gm14494-201ENSMUST00000118786 435 ntBASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Stag1Q9D3E6 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Gm5682-201ENSMUST00000173402 505 ntBASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Stag1Q9D3E6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Stag1Q9D3E6 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Gm11764-201ENSMUST00000120221 623 ntBASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms