Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Upk1aQ9D132 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.15■□□□□ 0.02
Upk1aQ9D132 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.15■□□□□ 0.02
Upk1aQ9D132 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Gm7370-201ENSMUST00000219471 767 ntBASIC15.15■□□□□ 0.02
Upk1aQ9D132 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Upk1aQ9D132 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Gm29707-201ENSMUST00000196325 491 ntBASIC15.14■□□□□ 0.01
Upk1aQ9D132 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Upk1aQ9D132 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms