Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hdhd3Q9CYW4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Gm7791-201ENSMUST00000219066 539 ntBASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hdhd3Q9CYW4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hdhd3Q9CYW4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Trmt13-210ENSMUST00000198454 880 ntBASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hdhd3Q9CYW4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Gm10698-201ENSMUST00000182663 604 ntBASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Gm37856-201ENSMUST00000191634 999 ntBASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hdhd3Q9CYW4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms