Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H2afb1Q9CQ70 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
H2afb1Q9CQ70 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
H2afb1Q9CQ70 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
H2afb1Q9CQ70 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H2afb1Q9CQ70 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H2afb1Q9CQ70 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H2afb1Q9CQ70 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Gm10013-201ENSMUST00000106074 672 ntBASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Gm11860-201ENSMUST00000122346 1010 ntBASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H2afb1Q9CQ70 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Gm9013-201ENSMUST00000132939 882 ntBASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
H2afb1Q9CQ70 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms