Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34aQ99PP6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim34aQ99PP6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trim34aQ99PP6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim34aQ99PP6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim34aQ99PP6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34aQ99PP6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim34aQ99PP6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim34aQ99PP6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim34aQ99PP6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Trim34aQ99PP6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Gm4899-201ENSMUST00000178708 719 ntBASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Trim34aQ99PP6 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Gm5648-201ENSMUST00000122244 1587 ntBASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Gm27300-201ENSMUST00000184085 97 ntBASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Gm27335-201ENSMUST00000184758 97 ntBASIC19.62■□□□□ 0.73
Trim34aQ99PP6 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim34aQ99PP6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Gm26308-201ENSMUST00000157768 69 ntBASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Gm6257-201ENSMUST00000163864 910 ntBASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim34aQ99PP6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim34aQ99PP6 Gm7787-201ENSMUST00000216858 688 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms