Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.68□□□□□ -0.22
Smim3Q99PE5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smim3Q99PE5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.67□□□□□ -0.22
Smim3Q99PE5 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smim3Q99PE5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.67□□□□□ -0.22
Smim3Q99PE5 Gm42545-201ENSMUST00000202755 922 ntBASIC13.67□□□□□ -0.22
Smim3Q99PE5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smim3Q99PE5 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.66□□□□□ -0.22
Smim3Q99PE5 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Smim3Q99PE5 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim3Q99PE5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim3Q99PE5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Gm13148-201ENSMUST00000118892 745 ntBASIC13.65□□□□□ -0.22
Smim3Q99PE5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Gm37025-201ENSMUST00000195159 829 ntBASIC13.65□□□□□ -0.22
Smim3Q99PE5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.65□□□□□ -0.22
Smim3Q99PE5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Smim3Q99PE5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms