Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr3Q99MB1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.13■□□□□ 0.33
Tlr3Q99MB1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tlr3Q99MB1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr3Q99MB1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr3Q99MB1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tlr3Q99MB1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tlr3Q99MB1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tlr3Q99MB1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Gm28659-201ENSMUST00000188013 759 ntBASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Tlr3Q99MB1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms