Protein–RNA interactions for Protein: Q99KG7

Hps4, Hermansky-Pudlak syndrome 4 protein homolog, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps4Q99KG7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps4Q99KG7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps4Q99KG7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps4Q99KG7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hps4Q99KG7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps4Q99KG7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hps4Q99KG7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Gm8344-201ENSMUST00000119813 856 ntBASIC18.71■□□□□ 0.59
Hps4Q99KG7 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.71■□□□□ 0.59
Hps4Q99KG7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.71■□□□□ 0.59
Hps4Q99KG7 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.71■□□□□ 0.59
Hps4Q99KG7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hps4Q99KG7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Hps4Q99KG7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Hps4Q99KG7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hps4Q99KG7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Gm4995-201ENSMUST00000117247 432 ntBASIC18.69■□□□□ 0.58
Hps4Q99KG7 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Hps4Q99KG7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Gm27702-201ENSMUST00000184512 56 ntBASIC18.68■□□□□ 0.58
Hps4Q99KG7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.68■□□□□ 0.58
Hps4Q99KG7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.68■□□□□ 0.58
Hps4Q99KG7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.68■□□□□ 0.58
Hps4Q99KG7 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hps4Q99KG7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps4Q99KG7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hps4Q99KG7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps4Q99KG7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hps4Q99KG7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.67■□□□□ 0.58
Hps4Q99KG7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms