Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcd2Q99JR8 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcd2Q99JR8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcd2Q99JR8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcd2Q99JR8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcd2Q99JR8 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcd2Q99JR8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smarcd2Q99JR8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.1■□□□□ 0.17
Smarcd2Q99JR8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Chchd1-203ENSMUST00000224633 557 ntBASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smarcd2Q99JR8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Smarcd2Q99JR8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcd2Q99JR8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.08■□□□□ 0.17
Smarcd2Q99JR8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcd2Q99JR8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcd2Q99JR8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Smarcd2Q99JR8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Gm6257-201ENSMUST00000163864 910 ntBASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Gm19164-201ENSMUST00000210667 640 ntBASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smarcd2Q99JR8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Gm18489-201ENSMUST00000172565 551 ntBASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.07■□□□□ 0.16
Smarcd2Q99JR8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Gm9682-201ENSMUST00000197505 556 ntBASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smarcd2Q99JR8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms