Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col20a1Q923P0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.8■□□□□ 0.6
Col20a1Q923P0 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.8■□□□□ 0.6
Col20a1Q923P0 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.8■□□□□ 0.6
Col20a1Q923P0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.8■□□□□ 0.6
Col20a1Q923P0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col20a1Q923P0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Gm14140-201ENSMUST00000119999 995 ntBASIC18.79■□□□□ 0.6
Col20a1Q923P0 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.79■□□□□ 0.6
Col20a1Q923P0 Gm8000-201ENSMUST00000188378 592 ntBASIC18.79■□□□□ 0.6
Col20a1Q923P0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.79■□□□□ 0.6
Col20a1Q923P0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Col20a1Q923P0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Gm5682-201ENSMUST00000173402 505 ntBASIC18.78■□□□□ 0.6
Col20a1Q923P0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.78■□□□□ 0.6
Col20a1Q923P0 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col20a1Q923P0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Col20a1Q923P0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.77■□□□□ 0.6
Col20a1Q923P0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col20a1Q923P0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col20a1Q923P0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col20a1Q923P0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col20a1Q923P0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Col20a1Q923P0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col20a1Q923P0 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Col20a1Q923P0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col20a1Q923P0 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Col20a1Q923P0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Col20a1Q923P0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms