Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44357-201ENSMUST00000195897 142 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm19658-201ENSMUST00000196231 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44367-201ENSMUST00000196836 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44350-201ENSMUST00000197197 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44390-201ENSMUST00000197533 144 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44313-201ENSMUST00000198018 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44486-201ENSMUST00000198508 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44314-201ENSMUST00000199263 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44394-201ENSMUST00000199558 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44484-201ENSMUST00000199873 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44466-201ENSMUST00000200264 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm44359-201ENSMUST00000200671 138 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha11Q91Y19 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Gm6376-201ENSMUST00000209407 580 ntBASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Mzt1-203ENSMUST00000227948 952 ntBASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha11Q91Y19 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha11Q91Y19 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Gm6296-201ENSMUST00000222599 943 ntBASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha11Q91Y19 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha11Q91Y19 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms