Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb22Q91XZ8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdhb22Q91XZ8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Gm12497-201ENSMUST00000138778 237 ntBASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Gm34391-201ENSMUST00000203706 907 ntBASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Gm7506-201ENSMUST00000207758 815 ntBASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Birc2-201ENSMUST00000054878 378 ntBASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdhb22Q91XZ8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm8825-201ENSMUST00000182565 998 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm4518-201ENSMUST00000182638 718 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdhb22Q91XZ8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Gm4459-201ENSMUST00000118750 468 ntBASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.59■□□□□ 0.57
Pcdhb22Q91XZ8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms