Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Rprl3-201ENSMUST00000157400 290 ntBASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb6Q91XZ4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Gm7284-201ENSMUST00000131667 944 ntBASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Gm25406-201ENSMUST00000157599 105 ntBASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Gm7977-201ENSMUST00000193787 748 ntBASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb6Q91XZ4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb6Q91XZ4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Pcdhb6Q91XZ4 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Gm6257-201ENSMUST00000163864 910 ntBASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb6Q91XZ4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Gm44454-201ENSMUST00000198541 138 ntBASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Pcdhb6Q91XZ4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb6Q91XZ4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms