Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 AA414768-201ENSMUST00000121924 1257 ntBASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Gm37722-201ENSMUST00000193757 208 ntBASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhga11Q91XY8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga11Q91XY8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdhga11Q91XY8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdhga11Q91XY8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga11Q91XY8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.41■□□□□ 0.06
Pcdhga11Q91XY8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga11Q91XY8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga11Q91XY8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga11Q91XY8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdhga11Q91XY8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms