Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Gm15165-201ENSMUST00000118140 502 ntBASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pcdhb17Q91VD8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Gm45610-201ENSMUST00000209227 784 ntBASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdhb17Q91VD8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Gm22709-201ENSMUST00000116893 111 ntBASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Gm17971-201ENSMUST00000190239 806 ntBASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb17Q91VD8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb17Q91VD8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb17Q91VD8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdhb17Q91VD8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb17Q91VD8 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb17Q91VD8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pcdhb17Q91VD8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Pcdhb17Q91VD8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Gm25406-201ENSMUST00000157599 105 ntBASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Gm19540-201ENSMUST00000221843 810 ntBASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb17Q91VD8 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms