Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm7729-201ENSMUST00000050143 801 ntBASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
H1fooQ8VIK3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Mir770-201ENSMUST00000103252 94 ntBASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
H1fooQ8VIK3 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
H1fooQ8VIK3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
H1fooQ8VIK3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
H1fooQ8VIK3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
H1fooQ8VIK3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Gm9013-201ENSMUST00000132939 882 ntBASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
H1fooQ8VIK3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms