Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Snrnp25Q8VIK1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Birc2-201ENSMUST00000054878 378 ntBASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Snrnp25Q8VIK1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.72■□□□□ 0.27
Snrnp25Q8VIK1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Gm9172-201ENSMUST00000212092 954 ntBASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Snrnp25Q8VIK1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Snrnp25Q8VIK1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Snrnp25Q8VIK1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Snrnp25Q8VIK1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Gm27459-201ENSMUST00000184860 107 ntBASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Gm43347-201ENSMUST00000200226 580 ntBASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Snrnp25Q8VIK1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms