Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim60Q8VI40 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim60Q8VI40 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.53■□□□□ 0.24
Trim60Q8VI40 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim60Q8VI40 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.52■□□□□ 0.24
Trim60Q8VI40 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim60Q8VI40 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim60Q8VI40 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim60Q8VI40 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trim60Q8VI40 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim60Q8VI40 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim60Q8VI40 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim60Q8VI40 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim60Q8VI40 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim60Q8VI40 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.52■□□□□ 0.23
Trim60Q8VI40 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim60Q8VI40 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trim60Q8VI40 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim60Q8VI40 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms