Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Gm18195-201ENSMUST00000207604 706 ntBASIC15.05■□□□□ -0
Ndc1Q8VCB1 Gm6376-201ENSMUST00000209407 580 ntBASIC15.05■□□□□ -0
Ndc1Q8VCB1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ndc1Q8VCB1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.04■□□□□ -0
Ndc1Q8VCB1 Gm36967-201ENSMUST00000193814 266 ntBASIC15.04■□□□□ -0
Ndc1Q8VCB1 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.04■□□□□ -0
Ndc1Q8VCB1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Gm6296-201ENSMUST00000222599 943 ntBASIC15.04■□□□□ -0
Ndc1Q8VCB1 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.04■□□□□ -0
Ndc1Q8VCB1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.04■□□□□ -0
Ndc1Q8VCB1 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44357-201ENSMUST00000195897 142 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm19658-201ENSMUST00000196231 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44367-201ENSMUST00000196836 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44350-201ENSMUST00000197197 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44390-201ENSMUST00000197533 144 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44313-201ENSMUST00000198018 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44486-201ENSMUST00000198508 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44314-201ENSMUST00000199263 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44394-201ENSMUST00000199558 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44484-201ENSMUST00000199873 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44466-201ENSMUST00000200264 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm44359-201ENSMUST00000200671 138 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.03■□□□□ -0
Ndc1Q8VCB1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ndc1Q8VCB1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms