Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx2ipQ8VC66 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
Ssx2ipQ8VC66 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ssx2ipQ8VC66 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Ssx2ipQ8VC66 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx2ipQ8VC66 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx2ipQ8VC66 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ssx2ipQ8VC66 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Ank2-226ENSMUST00000189368 339 ntBASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ssx2ipQ8VC66 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ssx2ipQ8VC66 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ssx2ipQ8VC66 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ssx2ipQ8VC66 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ssx2ipQ8VC66 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Gm14859-201ENSMUST00000117752 357 ntBASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 Gm27741-201ENSMUST00000185060 237 ntBASIC16.38■□□□□ 0.21
Ssx2ipQ8VC66 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms