Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdt1Q8R4E9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Cdt1Q8R4E9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.46■□□□□ 0.06
Cdt1Q8R4E9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Cdt1Q8R4E9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdt1Q8R4E9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
Cdt1Q8R4E9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Gm12644-201ENSMUST00000119935 606 ntBASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cdt1Q8R4E9 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Gm15372-201ENSMUST00000120729 834 ntBASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Rps4l-201ENSMUST00000071745 943 ntBASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdt1Q8R4E9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms