Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Chmp7Q8R1T1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Gm15358-201ENSMUST00000119249 520 ntBASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Chmp7Q8R1T1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Chmp7Q8R1T1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Gm4899-201ENSMUST00000178708 719 ntBASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Chmp7Q8R1T1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Gm6257-201ENSMUST00000163864 910 ntBASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Chmp7Q8R1T1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Gm27300-201ENSMUST00000184085 97 ntBASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Gm27335-201ENSMUST00000184758 97 ntBASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Chmp7Q8R1T1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Chmp7Q8R1T1 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms