Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afjQ8R1M2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afjQ8R1M2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afjQ8R1M2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afjQ8R1M2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2afjQ8R1M2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2afjQ8R1M2 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Mir5130-201ENSMUST00000175160 84 ntBASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2afjQ8R1M2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2afjQ8R1M2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afjQ8R1M2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
H2afjQ8R1M2 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.83□□□□□ -0.03
H2afjQ8R1M2 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
H2afjQ8R1M2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Gm13559-201ENSMUST00000120476 863 ntBASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
H2afjQ8R1M2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
H2afjQ8R1M2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms