Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm8825-201ENSMUST00000182565 998 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm4518-201ENSMUST00000182638 718 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Rpp40Q8R1F9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpp40Q8R1F9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpp40Q8R1F9 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rpp40Q8R1F9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rpp40Q8R1F9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rpp40Q8R1F9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpp40Q8R1F9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpp40Q8R1F9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rpp40Q8R1F9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Gm8655-201ENSMUST00000221159 852 ntBASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rpp40Q8R1F9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Gm6257-201ENSMUST00000163864 910 ntBASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rpp40Q8R1F9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Gm13418-201ENSMUST00000119097 944 ntBASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Gm4535-201ENSMUST00000182274 558 ntBASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Gm18622-201ENSMUST00000219361 595 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms