Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vopp1Q8R1C3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vopp1Q8R1C3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vopp1Q8R1C3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Gm6736-201ENSMUST00000166583 948 ntBASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Gm2213-201ENSMUST00000197485 688 ntBASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vopp1Q8R1C3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Gm44492-201ENSMUST00000197012 141 ntBASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Chchd1-203ENSMUST00000224633 557 ntBASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Vopp1Q8R1C3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vopp1Q8R1C3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vopp1Q8R1C3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Gm5177-201ENSMUST00000183092 997 ntBASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vopp1Q8R1C3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vopp1Q8R1C3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Vopp1Q8R1C3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vopp1Q8R1C3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms