Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf7Q8R0S1 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf7Q8R0S1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Atf7Q8R0S1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf7Q8R0S1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atf7Q8R0S1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Atf7Q8R0S1 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.86■□□□□ 0.61
Atf7Q8R0S1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Gm27704-201ENSMUST00000185094 107 ntBASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Atf7Q8R0S1 Prob1-201ENSMUST00000097619 3021 ntBASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Mir3081-201ENSMUST00000175305 84 ntBASIC18.84■□□□□ 0.61
Atf7Q8R0S1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Gm33142-201ENSMUST00000193913 867 ntBASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atf7Q8R0S1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf7Q8R0S1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf7Q8R0S1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf7Q8R0S1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Atf7Q8R0S1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Atf7Q8R0S1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atf7Q8R0S1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Atf7Q8R0S1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC18.83■□□□□ 0.6
Atf7Q8R0S1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atf7Q8R0S1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Rprl3-201ENSMUST00000157400 290 ntBASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms