Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trim31Q8R0K2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim31Q8R0K2 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trim31Q8R0K2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trim31Q8R0K2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trim31Q8R0K2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trim31Q8R0K2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim31Q8R0K2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim31Q8R0K2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim31Q8R0K2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim31Q8R0K2 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim31Q8R0K2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms