Protein–RNA interactions for Protein: Q8K212

Pacs1, Phosphofurin acidic cluster sorting protein 1, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pacs1Q8K212 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pacs1Q8K212 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pacs1Q8K212 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.18■□□□□ 0.18
Pacs1Q8K212 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.18■□□□□ 0.18
Pacs1Q8K212 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Pacs1Q8K212 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pacs1Q8K212 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pacs1Q8K212 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pacs1Q8K212 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pacs1Q8K212 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pacs1Q8K212 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.17■□□□□ 0.18
Pacs1Q8K212 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.17■□□□□ 0.18
Pacs1Q8K212 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pacs1Q8K212 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Gm25016-201ENSMUST00000158399 131 ntBASIC16.16■□□□□ 0.18
Pacs1Q8K212 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.16■□□□□ 0.18
Pacs1Q8K212 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pacs1Q8K212 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.15■□□□□ 0.18
Pacs1Q8K212 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Mir770-201ENSMUST00000103252 94 ntBASIC16.15■□□□□ 0.18
Pacs1Q8K212 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 AA414768-201ENSMUST00000121924 1257 ntBASIC16.15■□□□□ 0.18
Pacs1Q8K212 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.15■□□□□ 0.18
Pacs1Q8K212 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.15■□□□□ 0.18
Pacs1Q8K212 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pacs1Q8K212 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pacs1Q8K212 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pacs1Q8K212 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pacs1Q8K212 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pacs1Q8K212 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pacs1Q8K212 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pacs1Q8K212 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pacs1Q8K212 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms