Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rtn1Q8K0T0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Gm25406-201ENSMUST00000157599 105 ntBASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Gm10819-201ENSMUST00000099988 561 ntBASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Rtn1Q8K0T0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Gm15372-201ENSMUST00000120729 834 ntBASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Gm28033-201ENSMUST00000184224 96 ntBASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rtn1Q8K0T0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Gm9103-201ENSMUST00000119371 405 ntBASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rtn1Q8K0T0 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Rtn1Q8K0T0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn1Q8K0T0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn1Q8K0T0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn1Q8K0T0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn1Q8K0T0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn1Q8K0T0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rtn1Q8K0T0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rtn1Q8K0T0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms