Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Rp1l1Q8CGM2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Gm7653-201ENSMUST00000214567 508 ntBASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Gm5779-201ENSMUST00000218467 910 ntBASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Rp1l1Q8CGM2 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rp1l1Q8CGM2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rp1l1Q8CGM2 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rp1l1Q8CGM2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Rp1l1Q8CGM2 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Rp1l1Q8CGM2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Rp1l1Q8CGM2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Gm29541-201ENSMUST00000191351 678 ntBASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Gm10154-201ENSMUST00000084445 354 ntBASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Rp1l1Q8CGM2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Gm13823-201ENSMUST00000119930 345 ntBASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Gm18057-201ENSMUST00000208220 503 ntBASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Rp1l1Q8CGM2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms