Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
ShfQ8CG80 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ShfQ8CG80 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.27□□□□□ -0.13
ShfQ8CG80 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ShfQ8CG80 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ShfQ8CG80 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.26□□□□□ -0.13
ShfQ8CG80 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ShfQ8CG80 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ShfQ8CG80 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ShfQ8CG80 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ShfQ8CG80 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.24□□□□□ -0.13
ShfQ8CG80 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.24□□□□□ -0.13
ShfQ8CG80 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.24□□□□□ -0.13
ShfQ8CG80 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Gm21559-201ENSMUST00000220638 855 ntBASIC14.24□□□□□ -0.13
ShfQ8CG80 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Gm8587-201ENSMUST00000076538 843 ntBASIC14.24□□□□□ -0.13
ShfQ8CG80 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
ShfQ8CG80 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.24□□□□□ -0.13
ShfQ8CG80 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
ShfQ8CG80 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.23□□□□□ -0.13
ShfQ8CG80 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
ShfQ8CG80 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Mir6404-201ENSMUST00000183699 94 ntBASIC14.23□□□□□ -0.13
ShfQ8CG80 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.23□□□□□ -0.13
ShfQ8CG80 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.23□□□□□ -0.13
ShfQ8CG80 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
ShfQ8CG80 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms