Protein–RNA interactions for Protein: Q8CEF8

Rnf222, RING finger protein 222, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf222Q8CEF8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.54■□□□□ 0.08
Rnf222Q8CEF8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Psmb5-202ENSMUST00000227257 622 ntBASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Rnf222Q8CEF8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Rnf222Q8CEF8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Rnf222Q8CEF8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Rnf222Q8CEF8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms