Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb7Q8CDY9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Gm13836-201ENSMUST00000121159 501 ntBASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb7Q8CDY9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb7Q8CDY9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Gm9013-201ENSMUST00000132939 882 ntBASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb7Q8CDY9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pcdhb7Q8CDY9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms