Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Gm13597-201ENSMUST00000121239 375 ntBASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Gm7787-201ENSMUST00000216858 688 ntBASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Ndufaf2-202ENSMUST00000223734 556 ntBASIC19.65■□□□□ 0.74
Trim52Q8CDV4 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim52Q8CDV4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim52Q8CDV4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim52Q8CDV4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim52Q8CDV4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim52Q8CDV4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms