Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.62
Ccdc178Q8CDV0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc178Q8CDV0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Gm24589-201ENSMUST00000116692 94 ntBASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc178Q8CDV0 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Gm12895-201ENSMUST00000122214 226 ntBASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc178Q8CDV0 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Gm44430-201ENSMUST00000203376 995 ntBASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc178Q8CDV0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc178Q8CDV0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc178Q8CDV0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc178Q8CDV0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc178Q8CDV0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc178Q8CDV0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms