Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Gm14859-201ENSMUST00000117752 357 ntBASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Gm37722-201ENSMUST00000193757 208 ntBASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Gm18101-201ENSMUST00000215769 548 ntBASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Vcpip1Q8CDG3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Gm11355-201ENSMUST00000121120 306 ntBASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Vcpip1Q8CDG3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Gm9103-201ENSMUST00000119371 405 ntBASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Vcpip1Q8CDG3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms