Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lrif1Q8CDD9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Lrif1Q8CDD9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 BC037039-201ENSMUST00000192003 2205 ntBASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lrif1Q8CDD9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Lrif1Q8CDD9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lrif1Q8CDD9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lrif1Q8CDD9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lrif1Q8CDD9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lrif1Q8CDD9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lrif1Q8CDD9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lrif1Q8CDD9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms