Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Mir6404-201ENSMUST00000183699 94 ntBASIC16.82■□□□□ 0.28
Uba3Q8C878 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Uba3Q8C878 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.82■□□□□ 0.28
Uba3Q8C878 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Uba3Q8C878 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Uba3Q8C878 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Uba3Q8C878 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Uba3Q8C878 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Uba3Q8C878 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Uba3Q8C878 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Uba3Q8C878 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Uba3Q8C878 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Uba3Q8C878 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.82■□□□□ 0.28
Uba3Q8C878 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.81■□□□□ 0.28
Uba3Q8C878 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Uba3Q8C878 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.81■□□□□ 0.28
Uba3Q8C878 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Uba3Q8C878 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Uba3Q8C878 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.81■□□□□ 0.28
Uba3Q8C878 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.81■□□□□ 0.28
Uba3Q8C878 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Uba3Q8C878 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.81■□□□□ 0.28
Uba3Q8C878 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Uba3Q8C878 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Uba3Q8C878 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.81■□□□□ 0.28
Uba3Q8C878 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Uba3Q8C878 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Uba3Q8C878 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.8■□□□□ 0.28
Uba3Q8C878 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Uba3Q8C878 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.8■□□□□ 0.28
Uba3Q8C878 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.8■□□□□ 0.28
Uba3Q8C878 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.8■□□□□ 0.28
Uba3Q8C878 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.8■□□□□ 0.28
Uba3Q8C878 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Uba3Q8C878 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Uba3Q8C878 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.8■□□□□ 0.28
Uba3Q8C878 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.8■□□□□ 0.28
Uba3Q8C878 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Uba3Q8C878 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Uba3Q8C878 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Uba3Q8C878 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.79■□□□□ 0.28
Uba3Q8C878 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Uba3Q8C878 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Uba3Q8C878 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Uba3Q8C878 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Gm15372-201ENSMUST00000120729 834 ntBASIC16.79■□□□□ 0.28
Uba3Q8C878 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.79■□□□□ 0.28
Uba3Q8C878 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Gm25745-201ENSMUST00000174945 133 ntBASIC16.79■□□□□ 0.28
Uba3Q8C878 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.79■□□□□ 0.28
Uba3Q8C878 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.79■□□□□ 0.28
Uba3Q8C878 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.79■□□□□ 0.28
Uba3Q8C878 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Uba3Q8C878 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms