Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Gm37153-201ENSMUST00000193637 231 ntBASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col6a6Q8C6K9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm4518-201ENSMUST00000182638 718 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col6a6Q8C6K9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Gm4899-201ENSMUST00000178708 719 ntBASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col6a6Q8C6K9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.33□□□□□ -0.11
Col6a6Q8C6K9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
Col6a6Q8C6K9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a6Q8C6K9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a6Q8C6K9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Col6a6Q8C6K9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms