Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.17■□□□□ 0.18
Sh3rf2Q8BZT2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Gm13036-201ENSMUST00000117799 748 ntBASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Gm8000-201ENSMUST00000188378 592 ntBASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Gm5867-201ENSMUST00000063197 592 ntBASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Sh3rf2Q8BZT2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Gm27628-201ENSMUST00000184911 107 ntBASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf2Q8BZT2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Gm27646-201ENSMUST00000183989 110 ntBASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sh3rf2Q8BZT2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Sh3rf2Q8BZT2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf2Q8BZT2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms