Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cpne3Q8BT60 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.46■□□□□ 0.06
Cpne3Q8BT60 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cpne3Q8BT60 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Cpne3Q8BT60 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cpne3Q8BT60 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cpne3Q8BT60 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Gm10252-201ENSMUST00000209541 832 ntBASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cpne3Q8BT60 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Gm36967-201ENSMUST00000193814 266 ntBASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cpne3Q8BT60 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.43■□□□□ 0.06
Cpne3Q8BT60 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms